Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CcsQ9WU84 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.41□□□□□ -0.74
CcsQ9WU84 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.41□□□□□ -0.74
CcsQ9WU84 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.41□□□□□ -0.74
CcsQ9WU84 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm22065-201ENSMUST00000103753 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm22066-201ENSMUST00000103761 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24932-201ENSMUST00000103763 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24115-201ENSMUST00000103799 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm22190-201ENSMUST00000103827 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm22191-201ENSMUST00000103831 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24721-201ENSMUST00000103849 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm28018-201ENSMUST00000103869 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm26399-201ENSMUST00000103937 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.4□□□□□ -0.74
CcsQ9WU84 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm25349-201ENSMUST00000177728 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm23616-201ENSMUST00000177797 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm25871-201ENSMUST00000177816 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24752-201ENSMUST00000178240 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24496-201ENSMUST00000178287 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm25649-201ENSMUST00000178476 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm25548-201ENSMUST00000178681 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm23147-201ENSMUST00000178841 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm26095-201ENSMUST00000179270 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm22171-201ENSMUST00000179283 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm23936-201ENSMUST00000179354 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm22619-201ENSMUST00000179516 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm25255-201ENSMUST00000179579 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24755-201ENSMUST00000179691 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm26506-201ENSMUST00000179692 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm25086-201ENSMUST00000179931 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm23243-201ENSMUST00000180047 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24659-201ENSMUST00000180212 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm24169-201ENSMUST00000180244 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm23689-201ENSMUST00000180354 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm27359-201ENSMUST00000184153 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm27785-201ENSMUST00000184268 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm27466-201ENSMUST00000184396 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm27703-201ENSMUST00000184836 110 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.4□□□□□ -0.74
CcsQ9WU84 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
CcsQ9WU84 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.4□□□□□ -0.74
CcsQ9WU84 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
CcsQ9WU84 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CcsQ9WU84 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.4□□□□□ -0.75
CcsQ9WU84 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
CcsQ9WU84 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
CcsQ9WU84 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CcsQ9WU84 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
CcsQ9WU84 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
CcsQ9WU84 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CcsQ9WU84 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CcsQ9WU84 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CcsQ9WU84 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CcsQ9WU84 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CcsQ9WU84 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CcsQ9WU84 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CcsQ9WU84 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CcsQ9WU84 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.39□□□□□ -0.75
CcsQ9WU84 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CcsQ9WU84 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms