Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.91□□□□□ -0.5
Nubp2Q9R061 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.91□□□□□ -0.5
Nubp2Q9R061 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nubp2Q9R061 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm14928-201ENSMUST00000120198 477 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm37714-201ENSMUST00000194742 342 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm9794-201ENSMUST00000202370 423 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm18027-201ENSMUST00000218947 619 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm19220-201ENSMUST00000222682 803 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gm15823-201ENSMUST00000064305 670 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Paupar-201ENSMUST00000194826 3482 ntBASIC11.9□□□□□ -0.5
Nubp2Q9R061 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nubp2Q9R061 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nubp2Q9R061 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nubp2Q9R061 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nubp2Q9R061 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.9□□□□□ -0.51
Nubp2Q9R061 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nubp2Q9R061 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.89□□□□□ -0.51
Nubp2Q9R061 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Nubp2Q9R061 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.89□□□□□ -0.51
Nubp2Q9R061 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms