Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Gm42550-201ENSMUST00000201553 960 ntBASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp2aQ9DB34 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Chmp2aQ9DB34 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Chmp2aQ9DB34 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2aQ9DB34 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2aQ9DB34 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2aQ9DB34 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2aQ9DB34 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp2aQ9DB34 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm12403-201ENSMUST00000121384 959 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm15429-201ENSMUST00000151268 798 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm17330-201ENSMUST00000221047 165 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm24447-201ENSMUST00000083977 338 ntBASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp2aQ9DB34 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Gm28911-201ENSMUST00000188837 117 ntBASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp2aQ9DB34 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms