Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rsph3bQ9DA80 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rsph3bQ9DA80 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rsph3bQ9DA80 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rsph3bQ9DA80 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rsph3bQ9DA80 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rsph3bQ9DA80 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Gm12203-201ENSMUST00000118235 598 ntBASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Gm12209-201ENSMUST00000120089 596 ntBASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rsph3bQ9DA80 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gm13392-201ENSMUST00000117708 150 ntBASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gm16177-201ENSMUST00000120728 718 ntBASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gm10478-201ENSMUST00000084451 396 ntBASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rsph3bQ9DA80 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gm5370-201ENSMUST00000187187 574 ntBASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rsph3bQ9DA80 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms