Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Gm37714-201ENSMUST00000194742 342 ntBASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hcfc2Q9D968 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm45453-201ENSMUST00000211758 853 ntBASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Gm10819-201ENSMUST00000099988 561 ntBASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hcfc2Q9D968 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Hcfc2Q9D968 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hcfc2Q9D968 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms