Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.29□□□□□ -0.12
Tubgcp4Q9D4F8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm14350-201ENSMUST00000116642 640 ntBASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm8213-201ENSMUST00000118191 441 ntBASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm12203-201ENSMUST00000118235 598 ntBASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm12209-201ENSMUST00000120089 596 ntBASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubgcp4Q9D4F8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubgcp4Q9D4F8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubgcp4Q9D4F8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Tubgcp4Q9D4F8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms