Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Gm12859-201ENSMUST00000117834 427 ntBASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Gm38223-201ENSMUST00000194484 695 ntBASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Gm18307-201ENSMUST00000206864 949 ntBASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Gm45841-201ENSMUST00000207700 164 ntBASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx56Q9D0R4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Gm5866-201ENSMUST00000177881 973 ntBASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Gm37917-201ENSMUST00000194711 392 ntBASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx56Q9D0R4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Gm13689-201ENSMUST00000119360 685 ntBASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Gm18624-201ENSMUST00000220966 658 ntBASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ddx56Q9D0R4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms