Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col25a1Q99MQ5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Gm13385-201ENSMUST00000121089 220 ntBASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Spcs1-203ENSMUST00000226374 592 ntBASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col25a1Q99MQ5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm38144-201ENSMUST00000192790 465 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 AA914427-201ENSMUST00000193194 1166 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm7902-201ENSMUST00000198842 947 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gm3318-201ENSMUST00000217604 1183 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col25a1Q99MQ5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms