Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm3436-201ENSMUST00000179930 840 ntBASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm10766-202ENSMUST00000194123 606 ntBASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkd1Q99MH6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gm44344-201ENSMUST00000200287 129 ntBASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gm8396-201ENSMUST00000057361 823 ntBASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkd1Q99MH6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.61□□□□□ -0.39
Nkd1Q99MH6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms