Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx6-1Q99MA9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm16202-201ENSMUST00000117532 544 ntBASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx6-1Q99MA9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Nkx6-1Q99MA9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-1Q99MA9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-1Q99MA9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-1Q99MA9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-1Q99MA9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx6-1Q99MA9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gm11222-201ENSMUST00000119005 738 ntBASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 B9d1os-201ENSMUST00000137010 674 ntBASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gm19163-201ENSMUST00000223313 780 ntBASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx6-1Q99MA9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms