Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm15678-201ENSMUST00000117573 960 ntBASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm9522-201ENSMUST00000182394 926 ntBASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm44872-201ENSMUST00000207864 420 ntBASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm17330-201ENSMUST00000221047 165 ntBASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Mir7684-201ENSMUST00000183858 60 ntBASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Gm27989-201ENSMUST00000184721 107 ntBASIC12.93□□□□□ -0.34
Cstf3Q99LI7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cstf3Q99LI7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cstf3Q99LI7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms