Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.94□□□□□ -0.34
Vmp1Q99KU0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.93□□□□□ -0.34
Vmp1Q99KU0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vmp1Q99KU0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Gm21854-201ENSMUST00000179901 471 ntBASIC12.92□□□□□ -0.34
Vmp1Q99KU0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.92□□□□□ -0.34
Vmp1Q99KU0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Gm9797-201ENSMUST00000052902 613 ntBASIC12.92□□□□□ -0.34
Vmp1Q99KU0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms