Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Smarcd2Q99JR8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcd2Q99JR8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm25668-201ENSMUST00000157700 129 ntBASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm17376-201ENSMUST00000166016 84 ntBASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Gm6458-201ENSMUST00000211573 635 ntBASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Morn2-202ENSMUST00000227729 656 ntBASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcd2Q99JR8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gm11964-201ENSMUST00000120982 444 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gm11978-201ENSMUST00000122315 466 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gm17208-201ENSMUST00000168388 535 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gm6082-201ENSMUST00000215204 454 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Mir433-201ENSMUST00000093564 124 ntBASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcd2Q99JR8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms