Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.49□□□□□ -0.25
Cdk9Q99J95 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.48□□□□□ -0.25
Cdk9Q99J95 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Gm6222-201ENSMUST00000120787 396 ntBASIC13.48□□□□□ -0.25
Cdk9Q99J95 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.48□□□□□ -0.25
Cdk9Q99J95 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
Cdk9Q99J95 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk9Q99J95 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Matn2-203ENSMUST00000226766 3252 ntBASIC13.47□□□□□ -0.25
Cdk9Q99J95 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Gm11745-201ENSMUST00000121669 448 ntBASIC13.47□□□□□ -0.25
Cdk9Q99J95 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk9Q99J95 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Rprl2-201ENSMUST00000157150 290 ntBASIC13.46□□□□□ -0.25
Cdk9Q99J95 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk9Q99J95 Gm18057-201ENSMUST00000208220 503 ntBASIC13.46□□□□□ -0.25
Cdk9Q99J95 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms