Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.74■□□□□ 0.11
Col20a1Q923P0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm22018-201ENSMUST00000104357 131 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm16479-201ENSMUST00000121706 932 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm11978-201ENSMUST00000122315 466 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm25927-201ENSMUST00000175058 117 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm37008-201ENSMUST00000195712 319 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm45880-201ENSMUST00000213041 853 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm7399-201ENSMUST00000032395 858 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.74■□□□□ 0.11
Col20a1Q923P0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col20a1Q923P0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.73■□□□□ 0.11
Col20a1Q923P0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col20a1Q923P0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.72■□□□□ 0.11
Col20a1Q923P0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.72■□□□□ 0.11
Col20a1Q923P0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.72■□□□□ 0.11
Col20a1Q923P0 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.72■□□□□ 0.11
Col20a1Q923P0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.72■□□□□ 0.11
Col20a1Q923P0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Col20a1Q923P0 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.72■□□□□ 0.11
Col20a1Q923P0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms