Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Gm5639-201ENSMUST00000122305 2403 ntBASIC20.78■□□□□ 0.92
Clip1Q922J3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC20.78■□□□□ 0.92
Clip1Q922J3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Gm11222-201ENSMUST00000119005 738 ntBASIC20.77■□□□□ 0.92
Clip1Q922J3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Gm44772-201ENSMUST00000207623 1191 ntBASIC20.77■□□□□ 0.92
Clip1Q922J3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Clip1Q922J3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clip1Q922J3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clip1Q922J3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clip1Q922J3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Clip1Q922J3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clip1Q922J3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clip1Q922J3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC20.77■□□□□ 0.91
Clip1Q922J3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Clip1Q922J3 Gm38297-201ENSMUST00000195122 1057 ntBASIC20.76■□□□□ 0.91
Clip1Q922J3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Clip1Q922J3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC20.76■□□□□ 0.91
Clip1Q922J3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clip1Q922J3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Clip1Q922J3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC20.75■□□□□ 0.91
Clip1Q922J3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Clip1Q922J3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC20.75■□□□□ 0.91
Clip1Q922J3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clip1Q922J3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clip1Q922J3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Clip1Q922J3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clip1Q922J3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC20.74■□□□□ 0.91
Clip1Q922J3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Clip1Q922J3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC20.74■□□□□ 0.91
Clip1Q922J3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Clip1Q922J3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Clip1Q922J3 AC166051.1-201ENSMUST00000214313 210 ntBASIC20.74■□□□□ 0.91
Clip1Q922J3 Gm6082-201ENSMUST00000215204 454 ntBASIC20.74■□□□□ 0.91
Clip1Q922J3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Gm14752-201ENSMUST00000120719 2075 ntBASIC20.74■□□□□ 0.91
Clip1Q922J3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC20.74■□□□□ 0.91
Clip1Q922J3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Clip1Q922J3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC20.74■□□□□ 0.91
Clip1Q922J3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clip1Q922J3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clip1Q922J3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC20.73■□□□□ 0.91
Clip1Q922J3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms