Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.23□□□□□ -0.13
TraipQ8VIG6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Gm38002-201ENSMUST00000193255 180 ntBASIC14.23□□□□□ -0.13
TraipQ8VIG6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.23□□□□□ -0.13
TraipQ8VIG6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TraipQ8VIG6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.22□□□□□ -0.13
TraipQ8VIG6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.22□□□□□ -0.13
TraipQ8VIG6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gm7441-201ENSMUST00000220697 1074 ntBASIC14.22□□□□□ -0.13
TraipQ8VIG6 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.22□□□□□ -0.13
TraipQ8VIG6 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.22□□□□□ -0.13
TraipQ8VIG6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TraipQ8VIG6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm22018-201ENSMUST00000104357 131 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm25261-201ENSMUST00000157416 134 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TraipQ8VIG6 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm42627-201ENSMUST00000197347 224 ntBASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TraipQ8VIG6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms