Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Gm15770-201ENSMUST00000117498 584 ntBASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Mir7221-201ENSMUST00000184009 72 ntBASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Gm29541-201ENSMUST00000191351 678 ntBASIC10.91□□□□□ -0.66
Nup35Q8R4R6 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Gm18889-201ENSMUST00000174284 929 ntBASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Gm45841-201ENSMUST00000207700 164 ntBASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nup35Q8R4R6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup35Q8R4R6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup35Q8R4R6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup35Q8R4R6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup35Q8R4R6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nup35Q8R4R6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm24420-201ENSMUST00000176676 59 ntBASIC10.89□□□□□ -0.67
Nup35Q8R4R6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Mzt1-203ENSMUST00000227948 952 ntBASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nup35Q8R4R6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms