Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc59Q8R2N0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Gm13453-201ENSMUST00000118708 357 ntBASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Gm20949-201ENSMUST00000206478 952 ntBASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc59Q8R2N0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Gm14767-201ENSMUST00000121559 586 ntBASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc59Q8R2N0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc59Q8R2N0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc59Q8R2N0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc59Q8R2N0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc59Q8R2N0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc59Q8R2N0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc59Q8R2N0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms