Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gm16397-201ENSMUST00000122201 494 ntBASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gm6963-201ENSMUST00000147879 379 ntBASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gm19353-201ENSMUST00000184561 445 ntBASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gm37201-201ENSMUST00000191845 523 ntBASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col23a1Q8K4G2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Gm10179-201ENSMUST00000086233 688 ntBASIC16.02■□□□□ 0.16
Col23a1Q8K4G2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col23a1Q8K4G2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Gm15432-201ENSMUST00000121106 195 ntBASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 CT025551.1-201ENSMUST00000223996 692 ntBASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col23a1Q8K4G2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms