Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.21□□□□□ -0.29
Vps50Q8CI71 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps50Q8CI71 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps50Q8CI71 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps50Q8CI71 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm43703-201ENSMUST00000200523 763 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm2423-201ENSMUST00000074863 733 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.2□□□□□ -0.3
Vps50Q8CI71 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps50Q8CI71 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.19□□□□□ -0.3
Vps50Q8CI71 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm15957-201ENSMUST00000118893 974 ntBASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm15321-201ENSMUST00000121290 288 ntBASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm4804-201ENSMUST00000182234 999 ntBASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm6916-202ENSMUST00000205523 195 ntBASIC13.19□□□□□ -0.3
Vps50Q8CI71 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps50Q8CI71 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms