Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm25927-201ENSMUST00000175058 117 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm28693-202ENSMUST00000190758 331 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm37008-201ENSMUST00000195712 319 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Mir874-201ENSMUST00000104769 76 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm16479-201ENSMUST00000121706 932 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm38002-201ENSMUST00000193255 180 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm42627-201ENSMUST00000197347 224 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm7399-201ENSMUST00000032395 858 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab11fip3Q8CHD8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Mir686-201ENSMUST00000102174 109 ntBASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Gm45880-201ENSMUST00000213041 853 ntBASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rab11fip3Q8CHD8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rab11fip3Q8CHD8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms