Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Gm27618-201ENSMUST00000183671 60 ntBASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Gm27321-201ENSMUST00000185021 205 ntBASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smim4Q8C1Q6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Gm43575-201ENSMUST00000196420 516 ntBASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Gm43703-201ENSMUST00000200523 763 ntBASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smim4Q8C1Q6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smim4Q8C1Q6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms