Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Gm5354-201ENSMUST00000182417 973 ntBASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Gm24447-201ENSMUST00000083977 338 ntBASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sh3rf3Q8C120 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sh3rf3Q8C120 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm7488-201ENSMUST00000117148 684 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm12859-201ENSMUST00000117834 427 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm17330-201ENSMUST00000221047 165 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Gm5161-201ENSMUST00000075243 853 ntBASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Sh3rf3Q8C120 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Gm18041-201ENSMUST00000218210 618 ntBASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh3rf3Q8C120 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms