Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm25925-201ENSMUST00000158314 306 ntBASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm27321-201ENSMUST00000185021 205 ntBASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpne3Q8BT60 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Gm6912-201ENSMUST00000117218 544 ntBASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Gm13223-201ENSMUST00000118609 747 ntBASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpne3Q8BT60 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Gm4875-201ENSMUST00000118257 786 ntBASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cpne3Q8BT60 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
Cpne3Q8BT60 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne3Q8BT60 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cpne3Q8BT60 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.92□□□□□ -0.34
Cpne3Q8BT60 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms