Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rd3Q8BRE0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Gm7029-201ENSMUST00000173226 450 ntBASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Gm27243-201ENSMUST00000183964 521 ntBASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Gm42627-201ENSMUST00000197347 224 ntBASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Snora73a-201ENSMUST00000082453 205 ntBASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rd3Q8BRE0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm16202-201ENSMUST00000117532 544 ntBASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm13123-201ENSMUST00000122173 492 ntBASIC14.15□□□□□ -0.14
Rd3Q8BRE0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gm18935-201ENSMUST00000212692 664 ntBASIC14.15□□□□□ -0.14
Rd3Q8BRE0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rd3Q8BRE0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rd3Q8BRE0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms