Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm13730-201ENSMUST00000121036 1462 ntBASIC11□□□□□ -0.65
Smco3Q8BQM7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11□□□□□ -0.65
Smco3Q8BQM7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11□□□□□ -0.65
Smco3Q8BQM7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Gm13884-201ENSMUST00000118103 829 ntBASIC11□□□□□ -0.65
Smco3Q8BQM7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11□□□□□ -0.65
Smco3Q8BQM7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11□□□□□ -0.65
Smco3Q8BQM7 Gm28659-201ENSMUST00000188013 759 ntBASIC11□□□□□ -0.65
Smco3Q8BQM7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11□□□□□ -0.65
Smco3Q8BQM7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Smco3Q8BQM7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11□□□□□ -0.65
Smco3Q8BQM7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11□□□□□ -0.65
Smco3Q8BQM7 Gm37269-201ENSMUST00000193906 1891 ntBASIC11□□□□□ -0.65
Smco3Q8BQM7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Gm6973-201ENSMUST00000117080 721 ntBASIC10.99□□□□□ -0.65
Smco3Q8BQM7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Paupar-201ENSMUST00000194826 3482 ntBASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smco3Q8BQM7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm21362-201ENSMUST00000194272 928 ntBASIC10.98□□□□□ -0.65
Smco3Q8BQM7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm18027-201ENSMUST00000218947 619 ntBASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smco3Q8BQM7 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.98□□□□□ -0.65
Smco3Q8BQM7 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.98□□□□□ -0.65
Smco3Q8BQM7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms