Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Clrn3Q8BHH8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.6□□□□□ -0.39
Clrn3Q8BHH8 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Gm22189-201ENSMUST00000103822 86 ntBASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Gm15770-201ENSMUST00000117498 584 ntBASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.59□□□□□ -0.39
Clrn3Q8BHH8 Gm28760-201ENSMUST00000185995 736 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms