Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Depdc1bQ8BH88 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gm18905-201ENSMUST00000205454 928 ntBASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.56□□□□□ -0.08
Depdc1bQ8BH88 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Gm15240-201ENSMUST00000118156 720 ntBASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Depdc1bQ8BH88 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Gm5279-201ENSMUST00000199575 745 ntBASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Depdc1bQ8BH88 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms