Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Gm18737-201ENSMUST00000173594 937 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smndc1Q8BGT7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Gm22175-201ENSMUST00000175007 78 ntBASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Gm38225-201ENSMUST00000194001 393 ntBASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smndc1Q8BGT7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Map1b-203ENSMUST00000223725 2669 ntBASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smndc1Q8BGT7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smndc1Q8BGT7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13□□□□□ -0.33
Smndc1Q8BGT7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smndc1Q8BGT7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smndc1Q8BGT7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Smndc1Q8BGT7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smndc1Q8BGT7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smndc1Q8BGT7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms