Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm12403-201ENSMUST00000121384 959 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm29608-201ENSMUST00000190444 463 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm42550-201ENSMUST00000201553 960 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm9794-201ENSMUST00000202370 423 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.22□□□□□ -0.29
Ubp1Q811S7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.21□□□□□ -0.29
Ubp1Q811S7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.21□□□□□ -0.29
Ubp1Q811S7 Gm12138-201ENSMUST00000122180 951 ntBASIC13.21□□□□□ -0.29
Ubp1Q811S7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.21□□□□□ -0.29
Ubp1Q811S7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ubp1Q811S7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.21□□□□□ -0.3
Ubp1Q811S7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ubp1Q811S7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm11918-201ENSMUST00000121660 179 ntBASIC13.2□□□□□ -0.3
Ubp1Q811S7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.2□□□□□ -0.3
Ubp1Q811S7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ubp1Q811S7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms