Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctdp1Q7TSG2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Gm13453-201ENSMUST00000118708 357 ntBASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Gm27618-201ENSMUST00000183671 60 ntBASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctdp1Q7TSG2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ctdp1Q7TSG2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ctdp1Q7TSG2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ctdp1Q7TSG2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ctdp1Q7TSG2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ctdp1Q7TSG2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Gm14767-201ENSMUST00000121559 586 ntBASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.58□□□□□ -0.08
Ctdp1Q7TSG2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms