Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.28□□□□□ -0.6
Smim12Q78RX3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Smim12Q78RX3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim12Q78RX3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim12Q78RX3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Smim12Q78RX3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.27□□□□□ -0.6
Smim12Q78RX3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Smim12Q78RX3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.27□□□□□ -0.6
Smim12Q78RX3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Smim12Q78RX3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.27□□□□□ -0.61
Smim12Q78RX3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm4995-201ENSMUST00000117247 432 ntBASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm14767-201ENSMUST00000121559 586 ntBASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm27525-201ENSMUST00000184465 107 ntBASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm27321-201ENSMUST00000185021 205 ntBASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.27□□□□□ -0.61
Smim12Q78RX3 AW822252-206ENSMUST00000208904 237 ntBASIC11.27□□□□□ -0.61
Smim12Q78RX3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.27□□□□□ -0.61
Smim12Q78RX3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smim12Q78RX3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Gm2756-201ENSMUST00000195851 400 ntBASIC11.26□□□□□ -0.61
Smim12Q78RX3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smim12Q78RX3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms