Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ubfd1Q78JW9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ubfd1Q78JW9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ubfd1Q78JW9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ubfd1Q78JW9 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.03□□□□□ -0.32
Ubfd1Q78JW9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.03□□□□□ -0.32
Ubfd1Q78JW9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ubfd1Q78JW9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubfd1Q78JW9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gm13369-201ENSMUST00000119442 987 ntBASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gm8062-201ENSMUST00000139696 444 ntBASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubfd1Q78JW9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms