Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ParpbpQ6IRT3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
ParpbpQ6IRT3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
ParpbpQ6IRT3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ParpbpQ6IRT3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
ParpbpQ6IRT3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ParpbpQ6IRT3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ParpbpQ6IRT3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
ParpbpQ6IRT3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ParpbpQ6IRT3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Gm7488-201ENSMUST00000117148 684 ntBASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Gm12485-201ENSMUST00000119641 291 ntBASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Grk6-205ENSMUST00000224653 2976 ntBASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ParpbpQ6IRT3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ParpbpQ6IRT3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms