Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Mir874-201ENSMUST00000104769 76 ntBASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.4■□□□□ 0.54
Nop58Q6DFW4 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.4■□□□□ 0.54
Nop58Q6DFW4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop58Q6DFW4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nop58Q6DFW4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nop58Q6DFW4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Nop58Q6DFW4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nop58Q6DFW4 Gm13722-201ENSMUST00000117964 3066 ntBASIC18.39■□□□□ 0.54
Nop58Q6DFW4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm9103-201ENSMUST00000119371 405 ntBASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm45453-201ENSMUST00000211758 853 ntBASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm5422-201ENSMUST00000050717 2721 ntBASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop58Q6DFW4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Gm44492-201ENSMUST00000197012 141 ntBASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop58Q6DFW4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Gm27631-201ENSMUST00000184163 466 ntBASIC18.37■□□□□ 0.53
Nop58Q6DFW4 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop58Q6DFW4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 527.1 ms