Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm13408-201ENSMUST00000119822 798 ntBASIC15.43■□□□□ 0.06
Scn9aQ62205 Gm13935-201ENSMUST00000121859 798 ntBASIC15.43■□□□□ 0.06
Scn9aQ62205 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Scn9aQ62205 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.43■□□□□ 0.06
Scn9aQ62205 Gm45219-201ENSMUST00000205602 465 ntBASIC15.43■□□□□ 0.06
Scn9aQ62205 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Scn9aQ62205 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.43■□□□□ 0.06
Scn9aQ62205 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scn9aQ62205 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.42■□□□□ 0.06
Scn9aQ62205 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm11597-201ENSMUST00000121423 964 ntBASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.42■□□□□ 0.06
Scn9aQ62205 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
Scn9aQ62205 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm37666-201ENSMUST00000194110 866 ntBASIC15.42■□□□□ 0.06
Scn9aQ62205 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm44651-201ENSMUST00000207343 372 ntBASIC15.42■□□□□ 0.06
Scn9aQ62205 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.42■□□□□ 0.06
Scn9aQ62205 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Scn9aQ62205 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn9aQ62205 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.42■□□□□ 0.06
Scn9aQ62205 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Scn9aQ62205 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scn9aQ62205 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scn9aQ62205 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scn9aQ62205 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scn9aQ62205 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Scn9aQ62205 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Gm13045-201ENSMUST00000119019 712 ntBASIC15.41■□□□□ 0.06
Scn9aQ62205 Gm6963-201ENSMUST00000147879 379 ntBASIC15.41■□□□□ 0.06
Scn9aQ62205 Gm8194-201ENSMUST00000159783 859 ntBASIC15.41■□□□□ 0.06
Scn9aQ62205 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.41■□□□□ 0.06
Scn9aQ62205 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.41■□□□□ 0.06
Scn9aQ62205 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.41■□□□□ 0.06
Scn9aQ62205 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.41■□□□□ 0.06
Scn9aQ62205 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.41■□□□□ 0.06
Scn9aQ62205 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.41■□□□□ 0.06
Scn9aQ62205 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn9aQ62205 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn9aQ62205 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.4■□□□□ 0.06
Scn9aQ62205 Gm12291-201ENSMUST00000121627 311 ntBASIC15.4■□□□□ 0.06
Scn9aQ62205 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Gm19459-201ENSMUST00000176240 835 ntBASIC15.4■□□□□ 0.06
Scn9aQ62205 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
Scn9aQ62205 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.4■□□□□ 0.06
Scn9aQ62205 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn9aQ62205 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms