Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rai1Q61818 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rai1Q61818 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Rai1Q61818 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Rai1Q61818 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.73□□□□□ -0.37
Rai1Q61818 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Rai1Q61818 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm14109-201ENSMUST00000118814 309 ntBASIC12.73□□□□□ -0.37
Rai1Q61818 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm26956-201ENSMUST00000182176 986 ntBASIC12.73□□□□□ -0.37
Rai1Q61818 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.73□□□□□ -0.37
Rai1Q61818 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.73□□□□□ -0.37
Rai1Q61818 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.73□□□□□ -0.37
Rai1Q61818 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.73□□□□□ -0.37
Rai1Q61818 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rai1Q61818 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rai1Q61818 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rai1Q61818 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Gm13492-201ENSMUST00000119772 665 ntBASIC12.72□□□□□ -0.37
Rai1Q61818 Gm14017-201ENSMUST00000121934 386 ntBASIC12.72□□□□□ -0.37
Rai1Q61818 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.72□□□□□ -0.37
Rai1Q61818 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rai1Q61818 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.72□□□□□ -0.37
Rai1Q61818 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.72□□□□□ -0.37
Rai1Q61818 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Gm22058-201ENSMUST00000083393 310 ntBASIC12.72□□□□□ -0.37
Rai1Q61818 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.72□□□□□ -0.37
Rai1Q61818 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rai1Q61818 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rai1Q61818 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.72□□□□□ -0.37
Rai1Q61818 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rai1Q61818 Gm12217-201ENSMUST00000118858 696 ntBASIC12.72□□□□□ -0.37
Rai1Q61818 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.72□□□□□ -0.37
Rai1Q61818 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.72□□□□□ -0.37
Rai1Q61818 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rai1Q61818 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.72□□□□□ -0.37
Rai1Q61818 Gm5904-201ENSMUST00000210286 865 ntBASIC12.72□□□□□ -0.37
Rai1Q61818 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rai1Q61818 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rai1Q61818 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.71□□□□□ -0.37
Rai1Q61818 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.71□□□□□ -0.37
Rai1Q61818 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms