Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Six4Q61321 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.49□□□□□ -0.25
Six4Q61321 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.49□□□□□ -0.25
Six4Q61321 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.49□□□□□ -0.25
Six4Q61321 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Six4Q61321 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.49□□□□□ -0.25
Six4Q61321 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Six4Q61321 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.48□□□□□ -0.25
Six4Q61321 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Six4Q61321 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Six4Q61321 Gm14350-201ENSMUST00000116642 640 ntBASIC13.48□□□□□ -0.25
Six4Q61321 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Gm6244-201ENSMUST00000178732 841 ntBASIC13.48□□□□□ -0.25
Six4Q61321 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.48□□□□□ -0.25
Six4Q61321 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.48□□□□□ -0.25
Six4Q61321 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Six4Q61321 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Six4Q61321 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Six4Q61321 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Six4Q61321 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Six4Q61321 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Six4Q61321 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.47□□□□□ -0.25
Six4Q61321 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Six4Q61321 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.47□□□□□ -0.25
Six4Q61321 Gm13612-201ENSMUST00000119276 390 ntBASIC13.47□□□□□ -0.25
Six4Q61321 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.47□□□□□ -0.25
Six4Q61321 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Six4Q61321 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Six4Q61321 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.47□□□□□ -0.25
Six4Q61321 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.47□□□□□ -0.25
Six4Q61321 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Six4Q61321 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.47□□□□□ -0.25
Six4Q61321 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.47□□□□□ -0.25
Six4Q61321 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
Six4Q61321 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.47□□□□□ -0.25
Six4Q61321 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.47□□□□□ -0.25
Six4Q61321 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.47□□□□□ -0.25
Six4Q61321 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Six4Q61321 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms