Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip3Q60769 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm4984-201ENSMUST00000115987 360 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm13612-201ENSMUST00000119276 390 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm6152-201ENSMUST00000151704 340 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm27839-201ENSMUST00000184242 106 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Itm2b-204ENSMUST00000228637 783 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip3Q60769 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm5687-201ENSMUST00000118252 640 ntBASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm15824-201ENSMUST00000119516 955 ntBASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip3Q60769 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfaip3Q60769 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfaip3Q60769 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Tnfaip3Q60769 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfaip3Q60769 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms