Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Gm8194-201ENSMUST00000159783 859 ntBASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Gm27023-201ENSMUST00000182372 285 ntBASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Gm5051-201ENSMUST00000204085 485 ntBASIC23.15■■□□□ 1.3
Trim41Q5NCC3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC23.15■■□□□ 1.3
Trim41Q5NCC3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim41Q5NCC3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim41Q5NCC3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim41Q5NCC3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Trim41Q5NCC3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Gm7899-201ENSMUST00000192935 1897 ntBASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Gm13297-201ENSMUST00000120205 934 ntBASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Gm12208-201ENSMUST00000122004 163 ntBASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Gm9279-201ENSMUST00000223175 1606 ntBASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim41Q5NCC3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC23.13■■□□□ 1.29
Trim41Q5NCC3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Gm18584-201ENSMUST00000203098 964 ntBASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Gm4935-201ENSMUST00000221316 1198 ntBASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim41Q5NCC3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Gm37489-201ENSMUST00000191883 159 ntBASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Gm18212-201ENSMUST00000211678 889 ntBASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 AC154462.2-201ENSMUST00000227519 370 ntBASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim41Q5NCC3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Gm11637-201ENSMUST00000120601 592 ntBASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Gm16379-201ENSMUST00000161469 348 ntBASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Gm8762-201ENSMUST00000193486 339 ntBASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Gm44985-201ENSMUST00000206202 1016 ntBASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim41Q5NCC3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms