Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Gm16372-201ENSMUST00000073088 450 ntBASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm6754-201ENSMUST00000117124 913 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm16202-201ENSMUST00000117532 544 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm27572-201ENSMUST00000183702 255 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm5370-201ENSMUST00000187187 574 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm10268-201ENSMUST00000085340 555 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rc3h1Q4VGL6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Gm22018-201ENSMUST00000104357 131 ntBASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rc3h1Q4VGL6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms