Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Rprl2-201ENSMUST00000157150 290 ntBASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Gm45612-201ENSMUST00000211320 160 ntBASIC12.53□□□□□ -0.4
Trim40Q3UWA4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim40Q3UWA4 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim40Q3UWA4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim40Q3UWA4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim40Q3UWA4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim40Q3UWA4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim40Q3UWA4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim40Q3UWA4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim40Q3UWA4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms