Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm25214-201ENSMUST00000104573 129 ntBASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Gm14109-201ENSMUST00000118814 309 ntBASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Gm45770-201ENSMUST00000212105 616 ntBASIC13.39□□□□□ -0.27
Fam196aQ3USH1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fam196aQ3USH1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Gm25700-201ENSMUST00000177693 110 ntBASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fam196aQ3USH1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Gm12208-201ENSMUST00000122004 163 ntBASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Gm28693-202ENSMUST00000190758 331 ntBASIC13.37□□□□□ -0.27
Fam196aQ3USH1 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms