Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm16479-201ENSMUST00000121706 932 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm11978-201ENSMUST00000122315 466 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm2231-201ENSMUST00000125661 612 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm28693-202ENSMUST00000190758 331 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Snx27Q3UHD6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm45880-201ENSMUST00000213041 853 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Snx27Q3UHD6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Gm25927-201ENSMUST00000175058 117 ntBASIC14.4□□□□□ -0.1
Snx27Q3UHD6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms