Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Spg11Q3UHA3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Spg11Q3UHA3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm5616-201ENSMUST00000165252 384 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm8741-201ENSMUST00000174736 384 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Spg11Q3UHA3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Gm14058-201ENSMUST00000116082 735 ntBASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Gm6447-201ENSMUST00000118905 835 ntBASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Gm11978-201ENSMUST00000122315 466 ntBASIC12.19□□□□□ -0.46
Spg11Q3UHA3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.19□□□□□ -0.46
Spg11Q3UHA3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms