Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.13□□□□□ -0.95
Cops9Q3U898 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cops9Q3U898 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cops9Q3U898 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.12□□□□□ -0.95
Cops9Q3U898 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.12□□□□□ -0.95
Cops9Q3U898 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.12□□□□□ -0.95
Cops9Q3U898 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.12□□□□□ -0.95
Cops9Q3U898 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.12□□□□□ -0.95
Cops9Q3U898 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC9.12□□□□□ -0.95
Cops9Q3U898 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Cops9Q3U898 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cops9Q3U898 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 AC154747.3-201ENSMUST00000224471 3470 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.11□□□□□ -0.95
Cops9Q3U898 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cops9Q3U898 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms