Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.57□□□□□ -0.24
Ebf1Q07802 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ebf1Q07802 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.56□□□□□ -0.24
Ebf1Q07802 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ebf1Q07802 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ebf1Q07802 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Ebf1Q07802 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf1Q07802 Gm3961-201ENSMUST00000204425 994 ntBASIC13.56□□□□□ -0.24
Ebf1Q07802 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.56□□□□□ -0.24
Ebf1Q07802 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.56□□□□□ -0.24
Ebf1Q07802 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ebf1Q07802 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.55□□□□□ -0.24
Ebf1Q07802 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ebf1Q07802 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.55□□□□□ -0.24
Ebf1Q07802 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.55□□□□□ -0.24
Ebf1Q07802 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.55□□□□□ -0.24
Ebf1Q07802 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Ebf1Q07802 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Gm14723-201ENSMUST00000118686 215 ntBASIC13.55□□□□□ -0.24
Ebf1Q07802 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.55□□□□□ -0.24
Ebf1Q07802 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.55□□□□□ -0.24
Ebf1Q07802 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.55□□□□□ -0.24
Ebf1Q07802 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.55□□□□□ -0.24
Ebf1Q07802 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Itm2b-204ENSMUST00000228637 783 ntBASIC13.55□□□□□ -0.24
Ebf1Q07802 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ebf1Q07802 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.55□□□□□ -0.24
Ebf1Q07802 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ebf1Q07802 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ebf1Q07802 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.54□□□□□ -0.24
Ebf1Q07802 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.54□□□□□ -0.24
Ebf1Q07802 Gm4271-201ENSMUST00000174444 973 ntBASIC13.54□□□□□ -0.24
Ebf1Q07802 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.54□□□□□ -0.24
Ebf1Q07802 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.54□□□□□ -0.24
Ebf1Q07802 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.54□□□□□ -0.24
Ebf1Q07802 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ebf1Q07802 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.54□□□□□ -0.24
Ebf1Q07802 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ebf1Q07802 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.54□□□□□ -0.24
Ebf1Q07802 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Ebf1Q07802 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ebf1Q07802 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms