Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.37□□□□□ -0.75
Cdx4Q07424 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cdx4Q07424 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Cdx4Q07424 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.37□□□□□ -0.75
Cdx4Q07424 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Cdx4Q07424 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.36□□□□□ -0.75
Cdx4Q07424 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Gm22189-201ENSMUST00000103822 86 ntBASIC10.36□□□□□ -0.75
Cdx4Q07424 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Cdx4Q07424 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.36□□□□□ -0.75
Cdx4Q07424 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.36□□□□□ -0.75
Cdx4Q07424 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx4Q07424 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx4Q07424 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdx4Q07424 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx4Q07424 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx4Q07424 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Cdx4Q07424 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdx4Q07424 Gm21854-201ENSMUST00000179901 471 ntBASIC10.35□□□□□ -0.75
Cdx4Q07424 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.35□□□□□ -0.75
Cdx4Q07424 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdx4Q07424 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdx4Q07424 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdx4Q07424 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.35□□□□□ -0.75
Cdx4Q07424 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdx4Q07424 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.35□□□□□ -0.75
Cdx4Q07424 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx4Q07424 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms