Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Matn2-206ENSMUST00000228570 2798 ntBASIC11.76□□□□□ -0.53
Thbs3Q05895 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Thbs3Q05895 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Thbs3Q05895 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Gm15429-201ENSMUST00000151268 798 ntBASIC11.75□□□□□ -0.53
Thbs3Q05895 Gm8515-201ENSMUST00000194852 576 ntBASIC11.75□□□□□ -0.53
Thbs3Q05895 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.75□□□□□ -0.53
Thbs3Q05895 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Thbs3Q05895 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.75□□□□□ -0.53
Thbs3Q05895 Gm26315-201ENSMUST00000083890 321 ntBASIC11.75□□□□□ -0.53
Thbs3Q05895 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Thbs3Q05895 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.75□□□□□ -0.53
Thbs3Q05895 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Thbs3Q05895 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.74□□□□□ -0.53
Thbs3Q05895 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.74□□□□□ -0.53
Thbs3Q05895 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.74□□□□□ -0.53
Thbs3Q05895 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Thbs3Q05895 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Thbs3Q05895 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Thbs3Q05895 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.74□□□□□ -0.53
Thbs3Q05895 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gm12091-201ENSMUST00000146791 830 ntBASIC11.73□□□□□ -0.53
Thbs3Q05895 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.73□□□□□ -0.53
Thbs3Q05895 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.73□□□□□ -0.53
Thbs3Q05895 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Thbs3Q05895 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms